match no. | target id | target length | alignment length | probability | E-value | coverage | match description |
1 | 5IT7_Z | 70 | 39 | 70.6 | 2.6 | [ ---- ] | KLLA0D16027p, 60S ribosomal protein L3; ribosome, translocation, IRES, eEF2; HET: 6EM, MG, GCP; 3.6A {Kluyveromyces lactis} |
2 | 3JBO_2 | 68 | 47 | 68.2 | 3.3 | [ ------ ] | PROTEIN/RNA Complex; RIBOSOME; 5.8A {Plasmodium falciparum 3D7} |
3 | 5TBW_a | 70 | 37 | 60.0 | 6.3 | [ ---- ] | ?; Protein translation inhibitor, complex, ribosome; HET: MG, 7AL, OHX, ZN; 3.0A {Saccharomyces cerevisiae} |
4 | 2FU4_A | 83 | 42 | 50.0 | 13 | [ ----- ] | Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA; HET: CL; 1.8A {Escherichia coli} |
5 | 4LMY_A | 163 | 52 | 49.7 | 18 | [ ------ ] | Peroxide stress regulator PerR, FUR; Transcription Factor, Zinc Binding, Transcription; 1.6A {Streptococcus pyogenes} |
6 | 4LMY_B | 163 | 52 | 48.1 | 18 | [ ------ ] | Peroxide stress regulator PerR, FUR; Transcription Factor, Zinc Binding, Transcription; 1.6A {Streptococcus pyogenes} |
7 | 3EYY_B | 145 | 51 | 46.2 | 21 | [ ------ ] | Putative iron uptake regulatory protein; Nur, nickel-uptake regulator, D-domain, dimerization; HET: EDO, MLI; 2.4A {Streptomyces coelicolor} |
8 | 3I71_B | 68 | 35 | 46.1 | 13 | [ ----- ] | Ethanolamine utilization protein eutK; helix-turn-helix, UNKNOWN FUNCTION; HET: FLC; 2.1A {Escherichia coli} |
9 | 3JAH_ZZ | 75 | 38 | 41.5 | 20 | [ ----- ] | uL2, uL3, uL4, uL18, eL6; termination, eRF1, ABCE1, RIBOSOME; HET: SF4, MG, ADP; 3.45A {Oryctolagus cuniculus} |
10 | 5ERI_A | 169 | 72 | 40.7 | 29 | [ ------- ] | MarR family transcriptional regulator; Peptoclostridium difficile, MarR, Transcription factor; 2.3A {Peptoclostridium difficile} |
11 | 5FFZ_A | 140 | 38 | 37.0 | 71 | [ ----- ] | MarR family regulatory protein; Winged helix-turn-helix, protein-ligand complex, transcription; HET: ET; 2.585A {Staphylococcus aureus} |
12 | 3E6M_D | 161 | 34 | 36.7 | 51 | [ ---- ] | MarR family Transcriptional regulator; APC88769, MarR, Silicibacter pomeroyi DSS; 2.2A {Silicibacter pomeroyi} |
13 | 2JT1_A | 77 | 34 | 34.7 | 28 | [ ---- ] | PefI protein; solution NMR structure, winged helix-turn-helix; NMR {Salmonella typhimurium LT2} |
14 | 2JTV_A | 65 | 42 | 31.9 | 28 | [ ----- ] | Putative uncharacterized protein; Protein with unknown function RPA3401; NMR {Rhodopseudomonas palustris} |
15 | 1JSU_C | 84 | 16 | 31.1 | 41 | [ - ] | CYCLIN-DEPENDENT KINASE-2, CYCLIN A, P27; COMPLEX (TRANSFERASE-CYCLIN-INHIBITOR), KINASE, CELL CYCLE; 2.3A {Homo sapiens} SCOP: j.55.1.1 |
16 | 2P7C_B | 82 | 53 | 30.9 | 43 | [ ------ ] | Penicillinase repressor/DNA Complex; PROTEIN-DNA COMPLEX, REPRESSOR, MONOMER, OPERATOR; NMR {Bacillus licheniformis} SCOP: a.4.5.39 |
17 | 2FBI_A | 142 | 61 | 30.7 | 37 | [ ------- ] | probable transcriptional regulator; MarR, transcriptional regulator, APC5816, Structural; 2.1A {Pseudomonas aeruginosa} SCOP: a.4.5.28 |
18 | 2VN2_A | 128 | 28 | 30.1 | 33 | [ --- ] | CHROMOSOME REPLICATION INITIATION PROTEIN; DNAD, DNA REPLICATION, PRIMOSOME, REPLICATION; 2.3A {GEOBACILLUS KAUSTOPHILUS HTA426} |
19 | 5E1Z_B | 180 | 82 | 28.8 | 94 | [ --------- ] | Transcriptional regulator, MarR family; MarR transcriptional regulator, organohalide binding; HET: 5JC; 1.66A {Dehalococcoides mccartyi BTF08} |
20 | 1WI9_A | 72 | 50 | 28.7 | 46 | [ ------ ] | Protein C20orf116 homolog; helix-turn-helix motif, STRUCTURAL GENOMICS, RIKEN; NMR {Mus musculus} SCOP: a.4.5.47 |
21 | 4EM2_A | 178 | 76 | 28.3 | 1.2E+02 | [ -------- ] | Uncharacterized HTH-type transcriptional regulator SAR2349; marR family proteins, MarR, salicylate; HET: SAL, SO4; 2.08A {Staphylococcus aureus} |
22 | 5E1W_A | 180 | 81 | 28.2 | 94 | [ --------- ] | Transcriptional regulator, MarR family; MarR transcriptional regulator, organohalide binding; 1.392A {Dehalococcoides sp. CBDB1} |
23 | 3S2W_E | 159 | 77 | 27.5 | 73 | [ -------- ] | Transcriptional regulator, MarR family; structural genomics, PSI-Biology, protein structure; HET: SO4; 2.453A {Methanosarcina mazei} |
24 | 2HTJ_A | 81 | 44 | 27.3 | 76 | [ ------ ] | P fimbrial regulatory protein KS71A; winged helix-turn-helix, pap pili, TRANSCRIPTION; NMR {Escherichia coli} SCOP: a.4.5.73 |
25 | 3S2W_A | 159 | 68 | 27.1 | 73 | [ ------- ] | Transcriptional regulator, MarR family; structural genomics, PSI-Biology, protein structure; HET: SO4; 2.453A {Methanosarcina mazei} |
26 | 4RAY_B | 145 | 50 | 27.0 | 53 | [ ------ ] | DNA-binding transcriptional dual regulator of; ferric uptake regulator (FUR), metal; HET: FLC, SO4; 1.55A {Magnetospirillum gryphiswaldense} |
27 | 2PEX_B | 153 | 50 | 26.2 | 84 | [ ------ ] | Transcriptional regulator OhrR; transcription regulator; HET: FMT; 1.9A {Xanthomonas campestris} |
28 | 2NNN_A | 140 | 43 | 25.7 | 64 | [ ----- ] | Probable transcriptional regulator; Pseudomonas aeruginosa, probable transcriptional regulator; 2.4A {Pseudomonas aeruginosa} |
29 | 4EJO_A | 123 | 52 | 25.4 | 34 | [ ------ ] | Transcriptional regulator, PadR-like family; PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL; 2.1A {Eggerthella lenta} |
30 | 1LJ9_A | 144 | 67 | 25.3 | 79 | [ -------- ] | transcriptional regulator SlyA; HTH DNA binding protein, structural; 1.6A {Enterococcus faecalis} SCOP: a.4.5.28 |
31 | 4HBL_D | 149 | 33 | 25.3 | 1.5E+02 | [ ---- ] | Transcriptional regulator, MarR family; HTH, Transcription factor, DNA binding; 2.5A {Staphylococcus epidermidis} |
32 | 4FX0_B | 148 | 23 | 25.2 | 1.4E+02 | [ --- ] | PROBABLE TRANSCRIPTIONAL REPRESSOR PROTEIN; Helix-turn-helix, Transcriptional repressor, DNA binding; 2.6981A {Mycobacterium tuberculosis} |
33 | 2NNN_F | 140 | 48 | 23.9 | 64 | [ ------ ] | Probable transcriptional regulator; Pseudomonas aeruginosa, probable transcriptional regulator; 2.4A {Pseudomonas aeruginosa} |
34 | 2FE3_A | 145 | 51 | 23.8 | 2.1E+02 | [ ------ ] | Peroxide operon regulator; Oxidative stress regulator, DNA binding; 1.75A {Bacillus subtilis} |
35 | 2G9W_A | 138 | 44 | 23.4 | 41 | [ ----- ] | conserved hypothetical protein; DNA-binding domain, bacterial transcription repressor; 1.8A {Mycobacterium tuberculosis} SCOP: a.4.5.39 |
36 | 1SFX_A | 109 | 40 | 23.3 | 1.7E+02 | [ ----- ] | Conserved hypothetical protein AF2008; structural genomics, conserved hypothetical protein; HET: EDO; 1.55A {Archaeoglobus fulgidus} SCOP: a.4.5.50 |
37 | 5H20_A | 111 | 44 | 22.5 | 78 | [ ----- ] | Putative PadR-family transcriptional regulatory protein; bacteroid fragilis, transcription factor, PadR; HET: GLC, PO4; 2.5A {Bacteroides fragilis} |
38 | 2FE3_B | 145 | 51 | 22.5 | 2.1E+02 | [ ------ ] | Peroxide operon regulator; Oxidative stress regulator, DNA binding; 1.75A {Bacillus subtilis} |
39 | 4PT7_C | 136 | 37 | 22.4 | 40 | [ ---- ] | Replication initiator A family protein; replication initiation, multidrug resistance, PROTEIN; HET: SO4; 2.35A {Staphylococcus aureus CA-347} |
40 | 2GXG_A | 146 | 67 | 22.3 | 1.5E+02 | [ -------- ] | 146aa long hypothetical transcriptional regulator; Winged Helix, TRANSCRIPTION; 1.45A {Sulfolobus tokodaii} |
41 | 1R23_A | 122 | 23 | 21.6 | 1.5E+02 | [ --- ] | Transcriptional repressor smtB; DNA binding Transcriptional regulation, winged; 2.0A {Synechococcus elongatus PCC 7942} SCOP: a.4.5.5 |
42 | 1R1T_B | 122 | 23 | 21.6 | 1.5E+02 | [ --- ] | Transcriptional repressor smtB; transcriptional regulation, winged HTH protein; 1.7A {Synechococcus elongatus PCC 7942} SCOP: a.4.5.5 |
43 | 1JQS_B | 32 | 28 | 21.4 | 2.1E+02 | [ --- ] | 50S Ribosomal protein L11/Elongation Factor; L11, EF-G, cryo-EM, 70S E.coli;{Escherichia coli} SCOP: i.1.1.1 |
44 | 2RDP_A | 150 | 43 | 20.6 | 1.9E+02 | [ ----- ] | putative transcriptional regulator MarR; MarR, transcriptional regulator, pfam PF01047; HET: PO4; 2.3A {Geobacillus stearothermophilus} |
45 | 2P5L_D | 64 | 41 | 20.3 | 1.1E+02 | [ ----- ] | Arginine repressor/DNA Complex; DNA-binding domain, winged helix-turn-helix, ARG; HET: SO4; 2.85A {Bacillus subtilis} SCOP: a.4.5.3 |