match no. | target id | target length | alignment length | probability | E-value | coverage | match description |
1 | 1V96_B | 149 | 131 | 98.0 | 9.3E-06 | [------------------------------------------------ ] | hypothetical protein PH0500; Rossmann fold, tRNA synthetase, nucleotide; HET: GOL; 1.75A {Pyrococcus horikoshii} SCOP: c.120.1.1 |
2 | 1YE5_B | 149 | 131 | 97.9 | 8.1E-06 | [------------------------------------------------ ] | hypothetical protein PH0500; ROSSMANN FOLD, TRNA SYNTHETASE, NUCLEOTIDE; 2.0A {Pyrococcus horikoshii} SCOP: c.120.1.1 |
3 | 3ZVK_C | 134 | 120 | 97.5 | 2.7E-05 | [------------------------------------------ ] | TOXIN OF TOXIN-ANTITOXIN SYSTEM, ANTITOXIN; ANTITOXIN-TOXIN-DNA COMPLEX, PROTEIN-DNA COMPLEX; HET: MES; 2.5A {RICKETTSIA FELIS} |
4 | 3ZVK_A | 134 | 119 | 97.5 | 2.7E-05 | [----------------------------------------- ] | TOXIN OF TOXIN-ANTITOXIN SYSTEM, ANTITOXIN; ANTITOXIN-TOXIN-DNA COMPLEX, PROTEIN-DNA COMPLEX; HET: MES; 2.5A {RICKETTSIA FELIS} |
5 | 2H1C_A | 139 | 127 | 97.4 | 0.00019 | [------------------------------------------ ] | Trafficking protein B, Trafficking protein; DNA binding, PIN domain, RHH; HET: SO4; 1.8A {Neisseria gonorrhoeae} SCOP: c.120.1.1 |
6 | 5SV2_A | 146 | 118 | 97.2 | 0.00063 | [------------------------------------------- ] | Ribonuclease VapC21 (E.C.3.1.-.-); toxin-antitoxin, VapC, VapBC, RNAse, VapC21; 1.31A {Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)} |
7 | 1W8I_A | 156 | 126 | 97.2 | 6.5E-05 | [------------------------------------------- ] | PUTATIVE VAPC RIBONUCLEASE AF_1683 (E.C.3.1.-.-); STRUCTURAL GENOMICS, UNKNOWN FUNCTION, ARCHAEOGLOBUS; 2.1A {ARCHAEOGLOBUS FULGIDUS} SCOP: c.120.1.1 |
8 | 3H87_B | 156 | 119 | 97.1 | 0.00048 | [------------------------------------------- ] | Putative uncharacterized protein; toxin antitoxin complex, VapBC complex; HET: GOL; 1.49A {Mycobacterium tuberculosis} |
9 | 2FE1_A | 156 | 126 | 97.1 | 0.0016 | [------------------------------------------- ] | conserved hypothetical protein PAE0151; PIN DOMAIN, STRUCTURAL GENOMICS, UNKNOWN; 2.2A {Pyrobaculum aerophilum} SCOP: c.120.1.1 |
10 | 4CHG_A | 133 | 119 | 97.0 | 0.0018 | [------------------------------------------- ] | PROBABLE RIBONUCLEASE VAPC15, ANTITOXIN VAPB15; TOXIN-ANTITOXIN COMPLEX, PIN DOMAIN; 2.1A {MYCOBACTERIUM TUBERCULOSIS} |
11 | 3TND_C | 132 | 115 | 97.0 | 0.0012 | [----------------------------------------- ] | tRNA(fMet)-specific endonuclease VapC (E.C.3.1.-.-), Antitoxin; PIN domain, SpoVT/AbrB-like domain, Ribonuclease; HET: SO4; 2.7A {Shigella flexneri} |
12 | 5ECD_B | 138 | 120 | 97.0 | 0.00042 | [------------------------------------------ ] | tRNA(fMet)-specific endonuclease VapC (E.C.3.1.-.-); Toxin, PIN-domain, Hepes, hydrolase; HET: EPE; 1.75A {Shigella flexneri} |
13 | 4XGR_E | 132 | 120 | 96.8 | 0.0052 | [------------------------------------------ ] | VapC toxin, VapB antitoxin; Mycobacteria, addiction module, TOXIN-ANTITOXIN complex; HET: MSE; 2.7A {Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)} |
14 | 5X3T_F | 155 | 123 | 96.7 | 0.0021 | [------------------------------------------ ] | Antitoxin VapB26, Ribonuclease VapC26 (E.C.3.1.-.-); TA system, ANTITOXIN-TOXIN complex, RIBONUCLEASE; HET: MSE; 2.65A {Mycobacterium tuberculosis} |
15 | 5L6M_J | 128 | 113 | 96.6 | 0.0093 | [----------------------------------------- ] | VapB family protein, Ribonuclease VapC; PIN domain, toxin-antitoxin, ribonuclease, DNA-binding; HET: GOL, MLI; 1.9A {Caulobacter crescentus (strain ATCC 19089 / CB15)} |
16 | 4XGQ_C | 132 | 120 | 96.5 | 0.0054 | [------------------------------------------ ] | Ribonuclease VapC30, Antitoxin VapB30; Mycobacteria, addiction module, TOXIN-ANTITOXIN complex; 2.7A {Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)} |
17 | 5K8J_C | 128 | 113 | 96.5 | 0.0095 | [----------------------------------------- ] | VapB family protein, Ribonuclease VapC; PIN domain, toxin-antitoxin, ribonuclease, DNA-binding; HET: GOL, MSE; 1.6A {Caulobacter crescentus} |
18 | 2H1O_A | 143 | 127 | 96.4 | 0.01 | [------------------------------------------ ] | TRAFFICKING PROTEIN/DNA Complex; PIN domain, RHH protein, DNA; 3.0A {Neisseria gonorrhoeae} SCOP: c.120.1.1 |
19 | 2LCQ_A | 165 | 134 | 96.4 | 0.018 | [------------------------------------------------ ] | Putative toxin VapC6; PIN domain, ZN ribbon domain; HET: ZN; NMR {Pyrococcus horikoshii} |
20 | 3DBO_B | 150 | 119 | 94.8 | 0.041 | [------------------------------------------- ] | Uncharacterized protein; toxin antitoxin complex, VapBC, Mycobacterium; 1.76A {Mycobacterium tuberculosis} |
21 | 2MDT_A | 119 | 85 | 94.7 | 0.013 | [ -------------------------------- ] | Putative uncharacterized protein; hypothetical protein, UNKNOWN FUNCTION; NMR {Sulfolobus solfataricus} |
22 | 1O4W_A | 147 | 50 | 94.4 | 0.18 | [---------------- ] | PIN AF0591; PIN (PILT N-TERMINUS) DOMAIN, STRUCTURAL; 1.9A {Archaeoglobus fulgidus} SCOP: c.120.1.1 |
23 | 3I8O_A | 142 | 117 | 92.0 | 0.26 | [------------------------------------------- ] | KH domain-containing protein MJ1533; APC89320.5, Methanocaldococcus jannaschii DSM 2661; 2.638A {Methanocaldococcus jannaschii} |
24 | 3IX7_B | 134 | 108 | 85.8 | 0.78 | [------------------------------------------- ] | Uncharacterized protein TTHA0540; unknown function, Thermus thermophilus HB8; 2.15A {Thermus thermophilus} |
25 | 3IX7_A | 134 | 108 | 83.8 | 0.78 | [------------------------------------------- ] | Uncharacterized protein TTHA0540; unknown function, Thermus thermophilus HB8; 2.15A {Thermus thermophilus} |
26 | 1V8P_D | 158 | 42 | 78.2 | 4.7 | [--------------- ] | hypothetical protein PAE2754; PIN-domain, tetramer, STRUCTURAL GENOMICS, UNKNOWN; 2.52A {Pyrobaculum aerophilum} SCOP: c.120.1.1 |
27 | 1V8P_F | 158 | 42 | 76.3 | 4.7 | [--------------- ] | hypothetical protein PAE2754; PIN-domain, tetramer, STRUCTURAL GENOMICS, UNKNOWN; 2.52A {Pyrobaculum aerophilum} SCOP: c.120.1.1 |
28 | 3JBP_A6 | 98 | 48 | 69.4 | 6.2 | [ -------------- ] | PROTEIN/RNA Complex; RIBOSOME; 6.7A {Plasmodium falciparum 3D7} |
29 | 3V7Q_C | 101 | 49 | 66.7 | 8.1 | [ --------------- ] | Probable ribosomal protein ylxQ; L7Ae superfamily, K-turn binding, K-turn; HET: CIT; 1.55A {Bacillus subtilis} |
30 | 3J21_Z | 99 | 50 | 65.7 | 8.4 | [ --------------- ] | 50S ribosomal protein L1P, 50S; archaea, archaeal, ribosomal, 70S, kink-turn; 6.6A {Pyrococcus furiosus} |
31 | 2M0N_A | 112 | 67 | 64.7 | 21 | [ ----------------------- ] | Putative uncharacterized protein; tuberculosis, Structural Genomics, Seattle Structural; NMR {Mycobacterium abscessus} |
32 | 5T2A_e | 104 | 49 | 64.5 | 9.6 | [ -------------- ] | eL18, uL16, uL5, eL13, uL13; ribosome, Leishmania donovani; 2.9A {Leishmania donovani} |
33 | 5UMD_6 | 108 | 48 | 63.9 | 9.9 | [ -------------- ] | 60S ribosomal protein L2, 60S; Ribosome, protein synthesis, antimalarial; HET: MG, YMZ; 3.2A {Plasmodium falciparum 3D7} |
34 | 3ZF7_g | 105 | 49 | 58.1 | 15 | [ -------------- ] | 60S RIBOSOMAL PROTEIN L18, 60S; RIBOSOME, KINETOPLASTIDS, EXPANSION SEGMENTS, HIGH-RESOLUTION; 5.57A {TRYPANOSOMA BRUCEI BRUCEI} |
35 | 1YSH_C | 104 | 49 | 57.9 | 15 | [ -------------- ] | ribosomal protein L30/ribosomal protein L37a40S; STRUCTURAL PROTEIN, RNA, STRUCTURAL PROTEIN-RNA; 9.5A {Triticum aestivum} |
36 | 4V8P_HG | 104 | 49 | 57.8 | 18 | [ --------------- ] | Ribosome; RIBOSOME, EUKARYOTIC INITIATION FACTOR 6; HET: ZN, MG; 3.52A {TETRAHYMENA THERMOPHILA} |
37 | 4V7E_Cc | 112 | 48 | 57.6 | 14 | [ -------------- ] | Ribosome; eukaryotic ribosome, homology modeling, de; 5.5A {Triticum aestivum} |
38 | 1NMU_D | 104 | 48 | 56.4 | 19 | [ -------------- ] | maltose-binding periplasmic protein/60S ribosomal protein; structural flexibility, ribosomal protein L30; HET: MTT; 2.31A {Escherichia coli} SCOP: d.79.3.1 |
39 | 2KDX_A | 119 | 76 | 52.5 | 12 | [ --------------------------] | Hydrogenase/urease nickel incorporation protein hypA; metallochaperone, hydrogenase, Metal-binding, Nickel, METAL-BINDING; HET: ZN; NMR {Helicobacter pylori} |
40 | 3ON1_A | 101 | 54 | 47.4 | 28 | [ ----------------- ] | BH2414 protein; Structural Genomics, PSI-2, Protein Structure; 1.65A {Bacillus halodurans} |
41 | 3JAJ_c | 94 | 43 | 47.2 | 28 | [ ------------ ] | Ribosomal protein uL2, Ribosomal protein; mammalian, SRP, translocation, translation, RIBOSOME; HET: MG;{Oryctolagus cuniculus} |
42 | 2LBW_A | 121 | 49 | 46.1 | 45 | [ --------------- ] | H/ACA ribonucleoprotein complex subunit 2; L7Ae, snoRNP, scaRNP, RNA BINDING; NMR {Saccharomyces cerevisiae} |
43 | 3CPQ_B | 110 | 49 | 46.0 | 25 | [ --------------- ] | 50S ribosomal protein L30e; ribosomal, RNA-protein, elongation factor, Ribonucleoprotein; 1.9A {Methanocaldococcus jannaschii} |
44 | 1W41_A | 101 | 33 | 46.0 | 25 | [ --------- ] | 50S RIBOSOMAL PROTEIN L30E; RIBOSOMAL PROTEIN, ELECTROSTATIC INTERACTIONS, THERMOSTABILITY; 1.7A {THERMOCOCCUS CELER} SCOP: d.79.3.1 |
45 | 1K3X_A | 262 | 14 | 41.1 | 9.5 | [ ---- ] | ENDONUCLEASE VIII (E.C.3.2.-.-)/DNA Complex; HYDROLASE/DNA, HYDROLASE-DNA complex; HET: GOL, SO4; 1.25A {Escherichia coli} SCOP: g.39.1.8, b.113.1.1, a.156.1.2 |
46 | 1CN7_A | 104 | 48 | 40.7 | 19 | [ -------------- ] | 60S RIBOSOMAL PROTEIN L30E; RIBOSOMAL PROTEIN, AUTO-REGULATION OF PRE-MRNA; NMR {Saccharomyces cerevisiae} SCOP: d.79.3.1 |
47 | 3J39_c | 111 | 50 | 40.2 | 43 | [ --------------- ] | 60S ribosomal protein L10a-2, 60S; eukarya, eukaryotic, ribosomal, 80S, RNA; 6.0A {Drosophila melanogaster} |
48 | 1Q3B_A | 262 | 13 | 40.2 | 11 | [ ---- ] | Endonuclease VIII (E.C.3.2.2.-); hydrolase; 2.05A {Escherichia coli} SCOP: g.39.1.8, b.113.1.1, a.156.1.2 |
49 | 2KVC_A | 103 | 32 | 39.3 | 23 | [ --------- ] | Putative uncharacterized protein; tuberculosis, Structural Genomics, Seattle Structural; NMR {Mycobacterium tuberculosis} |
50 | 3VI6_A | 125 | 50 | 37.2 | 46 | [ --------------- ] | 60S ribosomal protein L30; three-layer alpha/beta/alpa, Ribosomal protein; 1.59A {Homo sapiens} |
51 | 3OL3_A | 107 | 62 | 35.2 | 29 | [ ----------------------- ] | Putative uncharacterized protein; Mycobacterium, tuberculosis, Rv0543c, ortholog, iodide; HET: PGE, IOD, PG4; 1.95A {Mycobacterium smegmatis} |
52 | 5LYB_c2 | 124 | 48 | 35.0 | 56 | [ -------------- ] | ?; ribosome, translation, protein synthesis, proline; HET: ZN, MG, OHX, PPU; 3.25A {Saccharomyces cerevisiae} |
53 | 2LKY_A | 112 | 29 | 32.4 | 32 | [ -------- ] | Uncharacterized protein; infectious disease, tuberculosis, DUF proteins; NMR {Mycobacterium smegmatis str. MC2 155} |
54 | 1K82_A | 268 | 13 | 32.2 | 16 | [ --- ] | Formamidopyrimidine-DNA glycosylase (E.C.3.2.2.23)/DNA Complex; PROTEIN-DNA COMPLEX, DNA REPAIR, BETA; 2.1A {Escherichia coli} SCOP: b.113.1.1, a.156.1.2, g.39.1.8 |
55 | 1Q86_H | 119 | 55 | 31.8 | 1.1E+02 | [ ----------------- ] | 50S RIBOSOMAL SUBUNIT; Ribosome 50S, A-site, P-site, PROTEIN-PROTEIN; HET: CL, PHA, MG, NA; 3.0A {Haloarcula marismortui} SCOP: d.79.3.1 |
56 | 2Z1D_B | 372 | 11 | 31.6 | 22 | [ --- ] | Hydrogenase expression/formation protein hypD; Chy400_2477 | 173 | 57 | 3VYR_B | 372 | 11 | 31.5 | 23 | [ --- ] | Hydrogenase expression/formation protein HypC, Hydrogenase; Chy400_2477 | 173 | 58 | 3J44_G | 123 | 55 | 30.2 | 58 | [ ----------------- ] | PROTEIN/RNA Complex; archaea, archaeal, ribosomal, 50S, protein; 9.0A {Methanococcus jannaschii} |
59 | 1WD2_A | 60 | 17 | 29.3 | 26 | [ -----] | Ariadne-1 protein homolog (E.C.6.3.2.19); RING, IBR, TRIAD, ZINC FINGER; HET: ZN; NMR {Homo sapiens} SCOP: g.44.1.1 |
60 | 1EE8_B | 266 | 12 | 28.6 | 21 | [ --- ] | CRYSTAL STRUCTURE OF MUTM (FPG); BETA SANDWICH, ZINC FINGER, HELIX; 1.9A {Thermus thermophilus} SCOP: b.113.1.1, a.156.1.2, g.39.1.8 |
61 | 3JBN_R | 114 | 33 | 27.2 | 77 | [ --------- ] | PROTEIN/RNA Complex; RIBOSOME; 4.7A {Plasmodium falciparum 3D7} |
62 | 1PJJ_A | 271 | 13 | 27.1 | 22 | [ ---- ] | Formamidopyrimidine-DNA glycosylase (E.C.3.2.2.23)/DNA Complex; DNA repair, Fpg, MutM, abasic; HET: GOL; 1.9A {Lactococcus lactis} SCOP: g.39.1.8, b.113.1.1, a.156.1.2 |
63 | 5WY9_A | 176 | 30 | 26.7 | 48 | [ --------- ] | Prostaglandin-H2 D-isomerase (E.C.5.3.99.2); Beta barrel, Synthetase, Chaperone; HET: 1PG, PG0; 1.45A {Homo sapiens} |
64 | 5JK9_D | 246 | 45 | 25.3 | 92 | [ -------------- ] | Izumo sperm-egg fusion protein 1; fertilization, IZUMO1, JUNO, CELL ADHESION; HET: NAG; 2.1A {Homo sapiens} |
65 | 4V7E_BM | 171 | 34 | 24.8 | 1.2E+02 | [ ---------- ] | Ribosome; eukaryotic ribosome, homology modeling, de; 5.5A {Triticum aestivum} |
66 | 1GOC_A | 156 | 32 | 24.7 | 72 | [ ---------- ] | RIBONUCLEASE H (E.C.3.1.26.4) MUTANT WITH; HYDROLASE(ENDORIBONUCLEASE); 2.0A {Escherichia coli} SCOP: c.55.3.1 |
67 | 3EDY_A | 544 | 22 | 24.5 | 2.5E+02 | [ ------- ] | Crystal Structure of the Precursor; protease, TPP1, sedolisin, Batten disease; HET: NAG, EDO; 1.85A {Homo sapiens} |
68 | 2MDA_A | 95 | 26 | 24.5 | 82 | [ ------- ] | Tyrosine 3-monooxygenase; Tyrosine hydroxylase, regulation, ACT domain; NMR {Rattus norvegicus} |
69 | 1K7K_A | 221 | 55 | 24.4 | 66 | [ ---------------- ] | Hypothetical protein yggV; MAD, His-tag, large groove, disordered; 1.5A {Escherichia coli} SCOP: c.51.4.1 |
70 | 3VMX_B | 48 | 17 | 23.9 | 60 | [ ----- ] | Voltage-gated hydrogen channel 1; COILED-COIL, ION CHANNEL, ION TRANSPORT; 1.45A {Mus musculus} |
71 | 5LZS_MM | 132 | 35 | 23.8 | 1.2E+02 | [ ---------- ] | uL2, uL3, uL4, 60S ribosomal; Translation, Elongation, Ribosome; HET: 7C4, GDP, MG, SEP; 3.31A {Oryctolagus cuniculus} |
72 | 3MGG_B | 276 | 76 | 23.6 | 1.6E+02 | [ ----------------------- ] | Methyltransferase (E.C.2.1.1.-); NYSGXRC, PSI-II, Protein structure Initiative; 1.86A {Methanosarcina mazei} |
73 | 1A3Y_A | 149 | 29 | 22.4 | 65 | [ --------- ] | ODORANT BINDING PROTEIN; LIPOCALIN, OLFACTION; 2.25A {Sus scrofa} SCOP: b.60.1.1 |
74 | 1T1E_A | 552 | 21 | 22.4 | 2.9E+02 | [ ------ ] | kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin; 1.18A {Bacillus sp. MN-32} SCOP: d.58.3.2, c.41.1.2 |
75 | 3PWF_A | 170 | 20 | 22.0 | 49 | [ ----- ] | Rubrerythrin; Non heme iron peroxidases, oxidative; 1.64A {Pyrococcus furiosus} |
76 | 2FC3_A | 124 | 52 | 21.9 | 2.4E+02 | [ ---------------- ] | 50S ribosomal protein L7Ae; alpha-beta-alpha sandwich, RIBOSOME, RNA BINDING; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 |
77 | 4V6W_AM | 139 | 33 | 21.8 | 1.2E+02 | [ --------- ] | Ribosome; eukarya, eukaryotic, ribosomal, 80S, RNA; 6.0A {Drosophila melanogaster} |
78 | 1VQ8_F | 120 | 100 | 21.7 | 1.2E+02 | [ ------------------------------------ ] | 50S RIBOSOMAL SUBUNIT; ribosome 50S, PROTEIN-PROTEIN COMPLEX, RNA-RNA; HET: SPS, MG, NA, SR, CL; 2.2A {Haloarcula marismortui} SCOP: d.79.3.1 |
79 | 3VN0_C | 51 | 18 | 21.4 | 73 | [ ----- ] | Voltage-gated hydrogen channel 1; COILED-COIL, ASSEMBLY DOMAIN, ION TRANSPORT; 1.37A {Mus musculus} |
80 | 4W23_M | 124 | 38 | 21.0 | 1.6E+02 | [ ----------- ] | PROTEIN/RNA Complex; mammalian, Sec61, translocation, translation, eEF2; HET: MG; 3.5A {Sus scrofa} |
81 | 1L8D_A | 112 | 13 | 20.9 | 38 | [ ---- ] | DNA double-strand break repair rad50; zinc finger, rad50, DNA repair; HET: PO4, CIT; 2.2A {Pyrococcus furiosus} SCOP: h.4.12.1 |
82 | 3A2A_B | 58 | 18 | 20.9 | 67 | [ ----- ] | Voltage-gated hydrogen channel 1; voltage-gated proton channel, Ion transport; 2.0A {Homo sapiens} |
83 | 2RPI_A | 112 | 31 | 20.7 | 87 | [ --------- ] | Ribonuclease H (E.C.3.1.26.4); submillisecond folding intermediate, Thermus thermophilus; NMR {Thermus thermophilus HB8} |
84 | 3APX_A | 190 | 29 | 20.7 | 72 | [ --------- ] | Alpha-1-acid glycoprotein 2; beta barrel, PLASMA PROTEIN, TRANSPORT; HET: Z80; 2.2A {Homo sapiens} |
85 | 1GKA_B | 174 | 28 | 20.6 | 1.2E+02 | [ --------- ] | CRUSTACYANIN A1 SUBUNIT, CRUSTACYANIN A2; LIPOCALIN, CRUSTACYANIN, LOBSTER, ASTAXANTHIN, BATHOCHROMIC; HET: EPE, D12, AXT; 3.23A {HOMARUS GAMMARUS} SCOP: b.60.1.1 |